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Genetic Features of the Marine Polychaete Sirsoe methanicola from Metagenomic Data

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Zenodo2022-12-12 更新2026-05-25 收录
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WebAUGUSTUS input and output data used in for eukaryotic gene prediction in <em>Sirsoe methanicola</em>: <strong>WebAUGUSTUS input data:</strong> capitella.fa - Nucleotide genomic sequence of <em>Capitella teleta</em> (NCBI accession: GCA_000328365.1) capitella-protein.faa - Protein sequences in the <em>Capitella teleta </em>genome (NCBI accession: GCA_000328365.1) big-contigs-wrapped.fa - Contigs &gt;= 3,000 bp long assembled from the <em>S. methanicola </em>metagenomes (NCBI BioProject ID PRJNA689840) that did not bin into any bacterial MAGs small-contigs-wrapped.fa - Contigs&lt; 3,000 bp long assembled from the <em>S. methanicola </em>metagenomes (NCBI BioProject ID PRJNA689840) that did not bin into any bacterial MAGs <strong>WebAUGUSTUS output data:</strong> augustus.bigcontigs.gff - WebAUGUSTUS GFF output file for contigs &gt;=3,000 bp augustus.smallcontigs.gff - WebAUGUSTUS GFF output file for contigs &lt;3,000 bp augustus.all.faa - All protein sequences predicted from the <em>S. methanicola </em>metagenomes using WebAUGUSTUS

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Zenodo
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2022-11-13
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