Ag3.0 (Ag1000G phase 3): Anopheles gambiae data resource

This data release includes copy number variant (CNV) calls, genome-wide single nucleotide polymorphism (SNP) calls, haplotypes as well as sample metadata and sequence read alignments from whole-genome sequencing of 2,784 wild-caught mosquitoes collected from 19 countries in sub-Saharan Africa, and 297 mosquitoes comprising parents and progeny of 15 lab crosses. Three mosquito species are represented: Anopheles gambiae , Anopheles coluzzii and Anopheles arabiensis . This data was generated by the Ag1000G project which is part of the MalariaGEN vector observatory but can also be analysed together with data from the Anopheles gambiae genomic surveillance project .