Data from the article "The mitochondrial phylogeny of land plants shows support for Setaphyta under non-stationary substitution models"
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Data from the article: "The mitochondrial phylogeny of land plants shows support for Setaphyta under non-stationary substitution models" Filipe de Sousa, Peter Civáň, João Brazão, Peter G. Foster, Cymon J. Cox These data are divided in four folders: * 1_36_gene_nt_alignments_&_trees - contains 36 single gene nucleotide alignments and the corresponding trees inferred from a MCMC analysis on the program p4 * 2_36_gene_aa_alignments_&_trees - contains 36 single gene amino acid alignments and the corresponding trees inferred from a MCMC analysis on the program p4 * 3_concatenated_alignments_&_trees - contains the nucleotide, codon-degenerate and amino acid alignments of 36 concatenated genes and the corresponding trees inferred from MCMC analyses on the programs p4 and phylobayes with composition homogeneous, tree-heterogeneous and site-heterogeneous models; trees correspond to figures S1-S7 on the online supplemental file. * 4_concatenated_ML_trees - contains the ML trees from the analyses of the concatenated datasets (nucleotide, codon degenerate and amino acid).



