five

Runtime of implementations on Pfam seed and full.

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https://figshare.com/articles/dataset/Runtime_of_implementations_on_Pfam_seed_and_full_/19319488
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The runtime benchmarks were obtained by running each algorithm on the seed and full multi-MSAs Pfam-A.seed and Pfam-A.full on 2 cores with 8 GB RAM for the seed alignments and on 3 cores with 12 GB RAM for the full alignments. We did not compute the maximum runtime of the Blue algorithm; the algorithm failed to terminate within 6 days for 34 families.
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2022-03-07
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