Table S4: from No evidence that a transmissible cancer has shifted from emergence to endemism in Tasmanian devils

Copy number variants.Genome coordinates, relative to mSarHar1.11 [7], of 155 copy number variants (CNVs) identified in one or more DFT1 tumours presented by Patton <i>et al</i>. [14]. Each CNV is defined as a “gain” or “loss”. CNVs associated with the unstable marker 5 chromosome (“IsMarker5”) [6,7], or occurring on a region of chromosome 5 prone to copy number instability in DFT1 (“IsRecurrent”) are labelled. Genotypes for 48 tumours presented by Patton <i>et al</i>. [14] are shown (1, presence; 0, absence). Three tumours (SAMN14418891 [T-1560], SAMN14418906 [T-223262], SAMN14418921 [T-695064]) were excluded due to insufficient DFT1 sequencing coverage. Visualisation of autosomal absolute copy number profile for each tumour is presented in supplementary data S2.