Additional file 3: Table S3. of The link between adjacent codon pairs and mRNA stability

Test for association of the inhibitory codon pairs with mRNA synthesis/decay rate, protein abundance per mRNA, ribosome occupancy, and protein decay rate. (A) Spearman’s correlation and partial correlation coefficients to assess associations between the fraction of the inhibitory codon pairs and the gene expression variables. P values obtained according to Kim [16] and those based on permutation tests are shown. (B) Same as (A) but for Kendall’s correlation coefficients. (C) Same as (A) but for the presence/absence of the inhibitory codon pairs. (D) Same as (B) but for the presence/absence of the inhibitory codon pairs. (XLSX 54 kb)