ETV1 and FOXF1 cistrome in wildtype GIST48, GIST-T1, MDA-PCa2b, and ETV1 or FOXF1 knocked-down GIST48 cells

ChIP profiles were generated by deep sequencing using Illumina HiSeq. Overall design: To examine the specific binding pattern of ETV1 and FOXF1 in different cell lineages, we performed performed ETV1 and FOXF1 ChIP-sequencing in GIST48 and MDA-PCa2b To directly examine whether FOXF1 can modulate binding of other transcription factors in GIST, we performed ETV1 and FOXF1 ChIP-sequencing in GIST48 cells with ETV1 or FOXF1 knockdown.