Additional file 2 of Transposable element expansion and low-level piRNA silencing in grasshoppers may cause genome gigantism

Additional file 2: Table S1. Proportion of repetitive elements in the genome. Table S2. Comparative analysis of repeat sequences in two species. Table S3. List of 41 TEs shared in the two species (copy number >500). Table S4. Annotations of Class I retrotransposon transcript (TPM>1). Table S5. Retrotransposon transcript quantification matrix (TPM normalization) of L. migratoria. Table S6. Retrotransposon transcript quantification matrix (TPM normalization) of A. rhodopa. Table S7. Abundance of piRNAs corresponding to 41 shared TEs (RPM normalization). Table S8. Abundance of sense piRNAs corresponding to L. migratoria retrotransposon transcripts (RPM normalization). Table S9. Abundance of antisense piRNAs corresponding to L. migratoria retrotransposon transcripts (RPM normalization). Table S10. Abundance of sense piRNAs corresponding to A. rhodopa retrotransposon transcripts (RPM normalization). Table S11. Abundance of antisense piRNAs corresponding to A. rhodopa retrotransposon transcripts (RPM normalization). Table S12. List of K2P divergence and abundance of 41 shared-TEs.