Datasets for: Integrative Mapping of Human CD8+ T Cell in Inflammation and Cancer
收藏NIAID Data Ecosystem2026-05-02 收录
下载链接：
https://zenodo.org/record/10472913
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资源简介：
Files for the integrated pan-disease CD8+ T cell atlas:
huARdb_v2_GEX.CD8.all_genes.h5ad.gz : 19957 genes raw matrix
huARdb_v2_GEX.CD8.hvg4k.h5ad : 4000 highly variable genes raw matrix
huARdb_v2_GEX.CD8.hvg4k.X_gex.npy : scatlasavae model embedding
huARdb_v2_GEX.CD8.clone_subtype.csv : clone type definition
huARdb_v2_GEX.CD8.hvg4k.supervised.model. scatlasavae model checkpoint
huARdb_v2_GEX.CD8.hvg4k.h5ad : Tex subset of 4000 highly variable genes raw matrix
huARdb_v2_GEX.CD8.hvg4k.Tex.supervised.model. scatlasavae model checkpoint for the Tex subset
Files for the TILs CD8+ T cell atlas
adata_cd8_chu.h5ad. the Chu et al., 2023 Dataset
adata_cd8_zheng.h5ad. The Zheng et al., 2021 Dataset
Files for the transfer (query) datasets:
Zhang_LC.CD8_T.h5ad
Luoma_HNSCC_TIL.CD8_T.h5ad
Luoma_HNSCC_PBMC.CD8_T.h5ad
Watson_MELA.CD8_T.h5ad
Bassez_BC.cohort1.CD8_T.h5ad
Bi_RCC.CD8_T.h5ad
Caushi_NSCLC.CD8_T.h5ad
Liu_TNBC.CD8_T.h5ad
Borràs_2024_Colorectal_cancer.CD8_T.h5ad
Garner_2023_MAIT.h5ad
Vorkas_2022_MAIT.h5ad
创建时间：
2024-12-04
