A High-quality Genome Assembly of Pseudocydonia sinensis Uncovers Uique Phenylpropanoid Pathways

Filename Description FormatPseudocydonia_sinensis.cds.fasta Coding sequence file, with each entry representing the nucleotide sequence of a gene. FASTAPseudocydonia_sinensis.prot.fasta Protein sequence file, with each entry corresponding to the amino acid sequence of a transcript. FASTAPseudocydonia_sinensis.annotation.gff3 Genome feature annotation file, describing the locations of genes, exons, and other genomic features. GFF3Pseudocydonia_sinensis.genome.fasta Genome sequence file, providing the complete nucleotide sequence of the genome. FASTAARK.pep.fa Protein sequence file containing the deduced ancestral protein sequences for the Rosaceae karyotype. FASTAARK.gff Simplified GFF file formatted specifically for WGDI toolkit. Contains seven columns: chromosome, gene ID, start, end, strand, order, and gene ID. This file represents the positional and structural information of reconstructed ancestral genes in the Ancestral Rosaceae Karyotype. GFF3(7-columns)