Supplementary data for "Fast and Accurate in silico Antigen Typing with Kaptive 3"

Supplementary data for "Fast and Accurate in silico Antigen Typing with Kaptive 3"Data included here:Fast and Accurate in silico Antigen Typing with Kaptive 3 Supplementary materials - DOCX file: Microsoft office document containing: Supplementary resultsTable S1. Confidence score criteria of Kaptive v≤2Figures S1-4Table S2 – CSV file: Test assemblies and Kaptive outputs. Assembly and sequencing information (columns A-M), Kaptive version, species and database (columns N-P), Kaptive output (columns Q-AH), ground truth locus calls and Kaptive call outcomes (columns AI-AM).Table S3 – CSV file: K and O/OC locus gene sequencing coverage and GC content. Genome information, species and Kaptive database, Illumina read coverage (non-subsampled reads), GC content and absolute GC difference compared to the matched completed chromosome.Table S4 – CSV file: Kaptive v3 score and weighting metric combinations for the test assemblies.Table S5 – CSV file: Performance metric summaries by assembly group and database.Table S6 – CSV file: Kaptive compute times