Additional file 2: of Whole-genome sequences of multidrug-resistant Escherichia coli in South-Kivu Province, Democratic Republic of Congo: characterization of phylogenomic changes, virulence and resistance genes

Amino acid substitutions in chromosomal AMR genes, as identified using ARIBA software. Genes involved in quinolones AMR (gyrA, gyrB, parC and parE) are highlighted in grey. Amino acid substitutions in quinolone resistance-determining region (QRDR) of the above-cited genes are in bold. (XLS 41.5 kb)