Sus scrofa (Pig Feb 2017 Sscrofa11.1)
收藏Genomic tRNA Database2026-04-18 收录
下载链接：
https://gtrnadb.ucsc.edu/genomes/eukaryota/Sscro11/
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资源简介：
High confidence set 472 tRNAs decoding standard 20 AA 471 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 21 Unexpected anticodons 1 Non-canonical anticodon loop length 1 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 58930 Secondary filter (low feature scores, possible rep. element) 3761 Tertiary filter (excessive isotype copies, possible rep. element) 39 Arg TCT 5 Leu CAA 6 Ile TAT 5 Tyr GTA 15 Isotype tRNA Count by Anticodon Total Ala AGC 20 GGC CGC 7 TGC 12 39 Gly ACC GCC 19 CCC 4 TCC 12 35 Pro AGG 8 GGG CGG 4 TGG 6 18 Thr AGT 11 GGT CGT 6 TGT 7 24 Val AAC 10 GAC CAC 10 TAC 7 27 Isotype tRNA Count by Anticodon Total Ser AGA 10 GGA CGA 5 TGA 4 ACT GCT 11 30 Arg ACG 8 GCG CCG 4 TCG 6 CCT 7 TCT 6 31 Leu AAG 7 GAG CAG 11 TAG 4 CAA 6 TAA 5 33 Isotype tRNA Count by Anticodon Total Phe AAA GAA 15 15 Asn ATT GTT 13 13 Lys CTT 14 TTT 16 30 Asp ATC GTC 19 19 Glu CTC 11 TTC 36 47 His ATG GTG 9 9 Gln CTG 10 TTG 6 16 Isotype tRNA Count by Anticodon Total Ile AAT 14 GAT CAT TAT 5 19 iMet/Met CAT 11/10 21 Tyr ATA GTA 16 16 Supres TCA CTA TTA 0 Cys ACA GCA 20 20 Trp CCA 9 9 SelCys TCA 1 1
提供机构：
UCSC Genomic tRNA Database
