Additional file 1: of Whole genome and transcriptome analysis reveal adaptive strategies and pathogenesis of Calonectria pseudoreteaudii to Eucalyptus

Table S1. Sequencing statistics of C. pseudoreteaudii. Table S2. Repeat sequences annotation of C. pseudoreteaudii. Table S3. Inventory of secondary metabolism backbone enzymes in C. pseudoreteaudii. Table S4. Inventory of secondary metabolism gene clusters in C. pseudoreteaudii. Table S5. Inventory of membrane transporters in C. pseudoreteaudii. Table S6. Upregulated (fold-change > 2) C. pseudoreteaudii membrane transporters in Eucalytpus tissue induced medium vs in PDB medium. Table S7. Number of carbohydrate-active enzyme modules of C. pseudoreteaudii and 13 other fungi according to the CAZy database. Table S8. Inventory of putative effectors in C. pseudoreteaudii. (XLS 238 kb)