Supplemental Material for Mesbahi et al., 2020
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Supplemental Figure 1. A. ChIP-seq data of ELT-3 binding to indicated collagen gene promoters. B. Summary of ELT-3 binding in the intergenic regions of indicated collagens (summarized from modEncode ChIP-seq data). Table S1.Collagen gene expression in response to bacterial exposures. Data summarized from (Coolon <i>et al.</i> 2009; Engelmann <i>et al.</i> 2011; MacNeil <i>et al.</i> 2013). Genes that were upregulated are shown in orange, downregulated in yellow. Classification of collagen genes as defined in (Teuscher <i>et al.</i> 2019). Collagens highlighted in red were selected for measuring in nCounter assays. Table S2Hypodermally enriched transcription factors. The overlap between TF2.0 transcription factors and genes enriched in the hypodermis (Kaletsky <i>et al.</i> 2018) was used to create a list of candidate regulators. Table S3.Nanostring probes and sequences used in nCounter analysis. RNAi target sequences.
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GSA Journals
创建时间：
2020-03-30
