This dataset contains the data for the classical microbiology part of the Beauchemin et al., 2021 article. The first three digits of the Sample_ID variable represent the herd identification.
The objective of this project is are to identify critical control points for preventing the spread of antibiotic resistance from manure to produce. Metagenomic samples have been collected of manure co
Taxonomic assignments of the most common bacterial genera found in each sample type, with their class-level designation given in parentheses. A relative abundance threshold of > 10% of all sequences w
