Genomic islands.

aIslands integrated into RNA genes are assigned the orientation of the target gene; remaining islands are arbitrarily assigned the genomic orientation.
bPutative att sites identified at each flank.
cStatus in the closely related K. pneumoniae HS11286 chromosome; No/Yes, absent/present in HS11286; Alt, alternative island in HS11286 at the Kpn2146 island site.
dThe PHAST islands are strongly phage-like; we note where other islands have proteins suggestive of phage function, and other features of interest.
eAll islands had phyloblocks support.
fDamage denotes loss of an acceptor stem nucleotide in the tRNA gene fragment [31]; phage names are the closest relatives determined by PHAST.
gCP003200.1/581777-594029; with IS903 inserted at position 4245 with 9-bp DR; directly at tRNA-Leu att site with no intervening Kpn21L.
h50403-bp alternative island at CP003200.1/1288317-1338720 with same initial 1989 bp as Kpn49R.
iCP003200.1/1778319-1808718; 2 mismatches; with 7201 bp deleted from peg.320 to 3′ end of gpII intron.
jCP003200.1/2277469-2325549; with ISEc22 at position 15471 with 8-bp DR.
kCP003200.1/4502805-4558770; with IS903B insert at position 9777 with 9-bp DR.
lCP003200.1/4819193-4835187; no mismatches.