Code and data to reproduce "Landscape structure and species life history effects on abundance-occupancy relationships"

## Landscape structure and species life history effects on abundance-occupancy relationships

### Citation

Code and data to reproduce the analyses from

> Dallas, TA, LA Holian, and C Ten Caten 2024. Landscape structure and species life history affect abundance-occupancy relationships.

## Compiling the project

To compile the R markdown, the following terminal command can be issued from the directory where the files are all located.

Note: this is not really recommended to compile it this way, as it will have to run for quite a long time.

```
Rscript -e 'install.packages(c("plyr", "dplyr", "igraph", "viridis"))'

Rscript -e 'rmarkdown::render("DallasNeonRicker.Rmd", output_format="pdf_document")'

```

```{r}

sessionInfo()

```

R version 4.1.0 (2021-05-18)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 20.04.2 LTS

Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/liblapack.so.3

locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C

attached base packages:
[1] stats graphics grDevices utils datasets methods base

other attached packages:
[1] dplyr_1.0.7 plyr_1.8.6 igraph_1.2.8

loaded via a namespace (and not attached):
[1] Rcpp_1.0.7 fansi_0.5.0 crayon_1.4.1 utf8_1.2.2
[5] R6_2.5.1 lifecycle_1.0.0 magrittr_2.0.1 pillar_1.6.2
[9] rlang_0.4.11 vctrs_0.3.8 generics_0.1.0 ellipsis_0.3.2
[13] tools_4.1.0 glue_1.4.2 purrr_0.3.4 compiler_4.1.0
[17] pkgconfig_2.0.3 tidyselect_1.1.1 tibble_3.1.4