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Supplementary Tables from Benchmarking Oxford nanopore read assemblers for high-quality molluscan genomes

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Figshare2021-03-03 更新2026-04-28 收录
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Supplementary Table S1. List of currently available lophotrochozoan genomes and their completeness. Genomes with a BUSCO score of the predicted gene models over 90% are highlighted in yellow, and genomes with a BUSCO score over 80% are highlighted in orange. Genomes published without annotated gene models were excluded. Supplementary Table S2. Detailed assembly results for the Scaly-foot Snail (Chrysomallon squamiferum) genome, with the best performance from each assembler being highlighted in yellow. Corr, corrected reads, trim, corrected and trimmed reads. NG50 represents the N50 value after normalization using the predicted genome size. Supplementary Table S3. Detailed Assembly results for the Scaly-foot Snail (Chrysomallon squamiferum) genome from the nine assemblers and QuickMerger. The best performance being highlighted in yellow. The input of QuickMerger is the Flye assembly (the best BUSCO score) and MaSuRCA assembly (hybrid assembly). NG50 represents the N50 value after normalization using the predicted genome size. Supplementary Table S4. Detailed assembly results for the Hard-shelled Mussel (Mytilus coruscus) genome, with the best performance from each assembler being highlighted in yellow. Corr, corrected reads, trim, corrected and trimmed reads. NG50 represents the N50 value after normalization using the predicted genome size.
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2021-03-03
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