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Analysis of RNA-seq SNPs.

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Figshare2015-12-02 更新2026-04-29 收录
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The program ssahaSNP was used to identify single nucleotide polymorphisms (SNPs), as compared to the reference genome sequence, that were located within genes targeted by both H3K9me3 and H3K36me3 on chromosome 19. Out of 72 SNPs that were identified, 40 SNPs and 3 wt nts were fixed in the RNA sequence data (the SNP or wt nt composed >90% of all nucleotides sequenced for this position) but there were 29 cases where both wt and SNP alleles are present in the RNA-seq tags approximately equally.
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2015-12-02
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