Yitpi WGS vs IWGSC RefSeq v1.0 Genome Assembly
收藏Research Data Australia2024-12-21 收录
下载链接:
https://researchdata.edu.au/yitpi-wgs-vs-genome-assembly/1604043
下载链接
链接失效反馈官方服务:
资源简介:
WGS reads of Yitpi (http://dx.doi.org/10.1111/j.1467-7652.2012.00717.x) were aligned against the IWGSC Triticum aestivum Chinese Spring RefSeq v1.0 genome assembly using Minimap2. These BAM files (.bam) and index files (.bam.bai) are provided together with a summary of read alignment coverage bigWig files (.bam.bw). SNP variants were called from these BAM files to generate VCF files (.bam.vcf.gz) and index files (.bam.vcf.gz.tbi) and are provided together with a summary of SNP density (SNPs per 10 kbp) bigWig files (.bam.vcf.w10000_s10000.bw). VCF files contain the following filter values and corresponding meaning: PASS = high quality (Q>=30) homozygous; Het = high quality (Q>=30) heterozygous; LowQualHom = low quality (Q
提供机构:
The University of Adelaide



