Environmental DNA metabarcoding reveals spatial and seasonal in fish community in the Venice Lagoon

NIAID Data Ecosystem2026-03-14 收录

环境DNA

鱼类群落生态

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP396533 数据链接链接失效反馈

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资源简介：

RAW fastq sequencing concerning the project - Environmental DNA metabarcoding reveals spatial and seasonal in fish community in the Venice Lagoon

创建时间：

2022-09-11

Data from: Non-specific amplification compromises environmental DNA metabarcoding with COI

环境DNA

分类学

1. Metabarcoding extra-organismal DNA from environmental samples is now a key technique in aquatic biomonitoring and ecosystem health assessment. However, choice of genetic marker and primer set is

DataCite Commons2025-06-01 更新60

Metabarcoding_inner_Oslofjord_2016_2017.xlsx

环境DNA

高通量测序

Samples was collected in the inner Oslofjord at 0-2m and 5m. 2L of water was filtered trough a 0.22 Sterivex-filter. DNA- was exstracted using Qiagen DNeasy Power Water Sterivex Kit (Qiagen, Germany)

DataCite Commons2020-08-27 更新50

Spatial representativeness of environmental DNA metabarcoding signal for fish biodiversity assessment in a natural freshwater system

环境DNA

淡水鱼类多样性

In the last few years, the study of environmental DNA (eDNA) has drawn attention for many reasons, including its advantages for monitoring and conservation purposes. So far, in aquatic environments, m

NIAID Data Ecosystem20

Data from Capo et al. (2019) Environmental DNA "Effects of filtration methods and water volume on quantification of brown trout (Salmo trutta) and Arctic char (Salvelinus alpinus) fish eDNA concentrations via droplet digital PCR"

环境DNA

水生生物检测

Dataset showing the number of DNA copy for each DNA extract (from char and trout cultivation tanks). For each DNA extracts, the filtered volume, dilution factors for the ddPCR and the raw outputs are

DataCite Commons2020-08-27 更新60

Data from Capo et al (2019) Plos ONE "Droplet digital PCR assays for the quantification of brown trout (Salmo trutta) and Arctic char (Salvelinus alpinus) from environmental DNA collected in the water of mountain lakes"

环境DNA

PCR

This data include the .glp files generated by the QX200 droplet digital PCR reader (and associated software) and a description of the samples analyses in each ddPCR run (README.txt file). This data co

DataCite Commons2020-08-26 更新30

Environmental DNA metabarcoding reveals spatial and seasonal in fish community in the Venice Lagoon

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