Angus Sequence Data: Animal 400-1
收藏agdatacommons.nal.usda.gov2024-10-21 更新2025-01-21 收录
下载链接:
https://agdatacommons.nal.usda.gov/articles/dataset/Angus_Sequence_Data_Animal_400-1/24666021/1
下载链接
链接失效反馈官方服务:
资源简介:
Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.The National Animal Germplasm Program does not have germplasm for this animal.There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3.Resources in this dataset:Resource Title: Animal 400-1 Sequence Data - SCINet,File Name: Web Page, url: https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node33206/tar file containing 14 files. The files are: RAPiD-Genomics_F112_CSU_136201_P001_WA05_i5-515_i7-101_S5_L003_R1_001.fastq.gz RAPiD-Genomics_F112_CSU_136201_P001_WA05_i5-515_i7-101_S5_L003_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WA05-i5-515-i7-101_S141_L002_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WA05-i5-515-i7-101_S141_L002_R2_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WA05-i5-515-i7-101_S5_L001_R1_001.fastq.gz RAPiD-Genomics-F113-CSU-136201-P001-WA05-i5-515-i7-101_S5_L001_R2_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WA05-i5-515-i7-101_S5_L003_R1_001.fastq.gz RAPiD-Genomics-F114-CSU-136201-P001-WA05-i5-515-i7-101_S5_L003_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WA05_i5-515_i7-101_S5_L001_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WA05_i5-515_i7-101_S5_L001_R2_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WA05_i5-515_i7-101_S5_L002_R1_001.fastq.gz RAPiD-Genomics_F115_CSU_136201_P001_WA05_i5-515_i7-101_S5_L002_R2_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WA05_i5-515_i7-101_S360_L002_R1_001.fastq.gz RAPiD-Genomics_F116_CSU_136201_P001_WA05_i5-515_i7-101_S360_L002_R2_001.fastq.gzThe .tar file can be accessed/retrieved with valid SCINet account at this location: /LTS/ADCdatastorage/NAL/published/node33206/400-1.tarSee the SCINet File Transfer guide for more information on moving large files: https://scinet.usda.gov/guides/data/datatransferGlobus users: The files can also be accessed through Globus by following this data link. The user will need to log in to Globus in order to retrieve this data. User accounts are free of charge with several options for signing on. Instructions for creating an account are on the login page.
全基因组序列数据集,针对牛科动物牛种(牛肉安格斯牛)。数据以“fastq”格式存储。国家动物种质资源项目未保存该动物的种质资源。每个文件包含两版,因采用双端测序技术。每个数据行对应两个读取序列(正向和反向读取),总计420个。该数据集的示意图可在收集数据集中找到。在图中,两个读取序列分别对应读取1和读取3。本数据集包含以下资源:
资源标题:动物400-1序列数据 - SCINet
文件名:网页
URL:https://app.globus.org/file-manager?origin_id=904c2108-90cf-11e8-9672-0a6d4e044368&origin_path=/LTS/ADCdatastorage/NAL/published/node33206/tar文件包含14个文件。文件列表如下:
RAPiD-Genomics_F112_CSU_136201_P001_WA05_i5-515_i7-101_S5_L003_R1_001.fastq.gz
RAPiD-Genomics_F112_CSU_136201_P001_WA05_i5-515_i7-101_S5_L003_R2_001.fastq.gz
...
RAPiD-Genomics_F116_CSU_136201_P001_WA05_i5-515_i7-101_S360_L002_R2_001.fastq.gz
.tar文件可通过有效的SCINet账户在以下位置访问/检索:/LTS/ADCdatastorage/NAL/published/node33206/400-1.tar
有关移动大型文件的更多信息,请参阅SCINet文件传输指南:https://scinet.usda.gov/guides/data/datatransfer
Globus用户:用户还可以通过遵循此数据链接通过Globus访问文件。用户将需要登录Globus以检索此数据。用户账户免费,并提供了多种登录选项。创建账户的说明位于登录页面。
提供机构:
Ag Data Commons



