Data and code underlying the publication: Accounting for spatio-temporal distribution changes in size-structured abundance estimates for a data-limited stock of Raja clavata
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This Repository consists of processed data and code to reproduce the analyses (model fitting, prediction and sampling from the posterior of the best model) for the associated article:Accounting for spatio-temporal distribution changes in size-structured abundance estimates for a data-limited stock of <em>Raja clavata</em><strong>DOI : </strong>https://doi.org/10.1093/icesjms/fsae106<br>Research-vessel catch data for the North Sea and Eastern English Channel was obtained from ICES database on trawl surveys (DATRAS) for <em>Raja clavata </em>(WoRMS AphiaID: 105883) and processed to create a final dataset for spatio-temporal analysis with integrated-nested laplace approximation (INLA). The final processed dataset consists of hauls and catches from the International Bottom Trawl Survey (NS-IBTS) for Quarter 1 and 3, the Beam Trawl Survey (NS-BTS) for Quarter 3, and the Channel Groundfish Survey (FR-CGFS) for Quarter 4. It further contains depth, substrate and habitat types associated with haul locations obtained from emodnet for the study area. The data and analyzes covers the period 1988-2023.<br>
本仓库包含用于复现关联论文分析流程(模型拟合、预测以及从最优模型后验分布中采样)的已处理数据与代码:**《针对数据受限的棘鳐(Raja clavata)种群基于体型结构的丰度估算中时空分布变化的校正》**,DOI:https://doi.org/10.1093/icesjms/fsae106
本研究针对棘鳐(Raja clavata,世界海洋物种登记册(WoRMS)AphiaID:105883),从国际海洋考察理事会(ICES)拖网调查数据库(DATRAS)获取了北海与英吉利海峡东部的科研渔船拖网捕捞数据,并进行预处理以构建最终数据集,用于集成嵌套拉普拉斯近似(INLA)的时空分析。
最终处理后的数据集涵盖了第1、3季度的国际底层拖网调查(NS-IBTS)、第3季度的桁杆拖网调查(NS-BTS)以及第4季度的海峡底层鱼类调查(FR-CGFS)的拖网站位与渔获量数据。此外,数据集还包含从欧洲海洋观测与数据网络(EMODnet)获取的研究区域内拖网站位相关的水深、底质与栖息地类型信息。
本数据集与配套分析流程覆盖的时间范围为1988年至2023年。
提供机构:
Parmentier, Bram
创建时间:
2024-09-10



