Comparison of BH1 animal status to candidate SV marker genotype calls to identify putative causative mutation for BH1.

1Columns represent the 20 candidate SV markers genotyped to compare concordance with BH1 animal status.2UMD 3.1 genome coordinates on Chr 7.3Ref. Allele is designated as “A” and represents the base call in the genome assembly and Alt. Allele is designated as “B” and represents the variant discovered by exome sequence data. “./.” indicates that no genotype was called. “DEL” equals deletion.4SV genotyped animals were grouped based on refined BH1 status as determined by BovineSNP50 genotypes; “Overall” represents summary of all animals together.5Brown Swiss animals with no BovineSNP50 genotypes.