Additional file 2 of Identification of Genomic Regions for Deep-Water Resistance in Rice for Efficient Weed Control with Reduced Herbicide Use

Additional file 2.Table S1. Temperate japonica 165 varieties used in phonotyping and GWAS. Table S2. Varieties with different genotypes of qPL3 and qTN4 used for qRT-PCR and sequencing of candidate genes. Table S3. Primers used in this study. Table S4. List of candidate genes with amino acid replacements or deletions or mutations in promoter region. Table S5. Varieties belonging to four genotypes about qPL3 and qTN4.