Deecker_Shayna_R_202211_PhD_datatables

Much of the data used to conduct the bioinformatic analyses in Chapter 3 of my PhD thesis consists of large tables that are unsuitable for the thesis format. They are available here under the filename:

Deecker_Shayna_R_202211_PhD_datatables.xlsx.

The contents of the tables are as follows:

Table S1: The Legionella pneumophila isolates used in this study.

Table S2: The hits for each L. pneumophila spacer from metagenomic sequences.

Table S3: The hits for each L. pneumophila spacer in complete and/or draft genomes.

Table S4: The accession numbers and Microviridae subfamily classifications for the major
capsid phylogeny tree.

Table S5: The mobile elements predicted by both PhiSpy and VirSorter.

Table S6: Orthologous groups for LME-1 and their predicted function by BLASTp against the viral database (taxid:10239) and by HHpred against the Uniprot SwissProt viral database (Uniprot-SwissProt-versio-70_23_aug_2020) with a probability cutoff of >70%.

Table S7: List of CRISPR-Cas spacers from all examined L. pneumophila isolates.