COI metabarcoding dataset and bioinformatic pipeline for Agama picticauda diet analysis across Florida, Grande Comore, and Réunion Island
收藏资源简介：
Invasive predator, invasive prey: metabarcoding reveals how Agama picticauda exploits novel and urban food websBiological Invasions Tim L. Heller (corresponding author)Department of Evolutionary Biology, Ludwig-Maximilians-Universität München, Planegg-Martinsried, Germanycontact@timlheller.com Kathleen C. Webster, Markus A. Roesch, Lisa N. Barrow, Hindatou Saidou, Nassourdine A. Mroudjaé, Yahaya Ibrahim, Sohan Sauroy-Toucouère, D. James Harris, Oliver Hawlitschek, Alexander Keller This Zenodo repository contains all data and scripts associated with this study. The provided data ensures full reproducibility of the presented results. It includes: Bioinformatic scripts used for processing COI metabarcoding gut content data Input datasets for all analyses Processed dietary occurrence matrices Metadata linking samples to geographic origin (Florida, Grande Comore, Réunion Island) Code used for classification of prey taxa as invasive, urban-associated, or non-urban-associated based on occurrence data and human population density layers All analyses were conducted to quantify dietary composition of invasive Agama picticauda populations across multiple regions and to assess the contribution of urban-associated and non-native prey to their diet. This repository enables full reproducibility of all results presented in the manuscript.
