Additional file 2 of Genome-wide association study and transcriptome analysis reveal key genes affecting root growth dynamics in rapeseed
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Additional file 2: Table S1 Trait statistics collected at the five stages of each repetition. Table S2 Correlations in each captured trait among replication at five stages. Table S3 Summary of SNPs and LD decay on 19 chromosomes of B. napus. Table S4 Detailed information on trait-related significant SNPs identified by GWAS. Table S5 Detailed information on 48 valid QTL clusters. Table S6 Correlations among root-related traits at each examined stage. Table S7 RNA-Seq statistics of four growth types against B. napus reference genome. Table S8 FPKM of persistent DEGs. Table S9 GO enrichment results of persistent DEGs. Table S10 FPKM of stage-specific DEGs. Table S11 GO enrichment results of stage-specific expressed genes. Table S12 FPKM of genes located in haplotype blocks on 48 QTL clusters. Table S13 Information on peak SNPs overlapped with SNPs reported by Wang et al. (2017). Table S14 Primers used in this study.
创建时间:
2023-06-28



