Data and code for: Dynamic transposable element expression during Hydra head regeneration
收藏官方服务:
资源简介:
Bash shell scripts for repeat modeler, masker, and STAR mapping. Custom script to keep class_id from repeat masker output (rmOUT_to_gtf.awk) Custom script to merge counts (R_script_merge_counts) Counts table including all genes and TEs used for analysis (tsv table) R script includes DDseq analysis, pairwise 12h comparisons, volcano plots, and heatmap code (Hydra_DDEseq_TE.r)
提供机构:
Zenodo创建时间:
2026-01-27



