Predictions of transcription factor binding sites of JA-, ABA-, SA- and Ethylene pathway genes in Arabidopsis thaliana
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Plant physiological processes are under the strong regulation of the phytohormone signaling network. Phytohormones are derivatives of primary and secondary metabolism, like salicylic acid, ethylene, jasmonic acid, and abscisic acid. The regulation of plant stress responses, adaptation to the environment, growth, or differentiation depend on the synthesis, transport, expression, and transcription control of genes and their regulatory proteins involved in these pathways. Therefore, we collected and grouped the all-possible transcription factors (TFs) and their predicted promoter binding sites of 35 genes that regulate these four pathways. This data presents the lists of TFs of the investigated key genes and their promoter specificity data queried from the EPDnew database using two probability P values in A. thaliana model plant.
植物生理过程受到植物激素信号转导网络的严格调控。植物激素(phytohormone)是初生代谢与次生代谢的衍生物,例如水杨酸(salicylic acid)、乙烯(ethylene)、茉莉酸(jasmonic acid)以及脱落酸(abscisic acid)。植物胁迫响应、环境适应、生长及分化的调控,依赖于上述通路中相关基因及其调控蛋白的合成、转运、表达与转录调控。因此,我们收集并归类了调控上述四类通路的35个基因的所有潜在转录因子(TFs)及其预测启动子结合位点。本数据集包含模式植物拟南芥(A. thaliana)中所研究的关键基因的转录因子列表,以及通过两种概率P值从EPDnew数据库中检索得到的启动子特异性数据。



