Sheet1 ToolsComparison: ChIP-seq pipeline software comparison. Sheet2 Examples of ChiLin report. A summary of example data annotation of transcription factor, chromatin regulatory factor and histone m

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Additional file 8: File S1. of ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

ChIP-seq质量控制

遗传学数据分析

H3K27me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S2. Second H3K27me3 data QC report from ChiLin. The sequencing reads had bee

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strand cross correlation examples

ChIP-seq质量控制

高通量测序

strand cross correlation examples using phantompeakqualtools software: https://code.google.com/p/phantompeakqualtools/

Figshare2016-01-18 更新40

Inherent Signals in Sequencing-Based Chromatin-ImmunoPrecipitation Control Libraries

ChIP-seq质量控制

基因组学偏差分析

BackgroundThe growth of sequencing-based Chromatin Immuno-Precipitation studies call for a more in-depth understanding of the nature of the technology and of the resultant data to reduce false positiv

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Broadly-applicable control approaches improve accuracy of ChIP-seq data

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