RNAseq of Danio Rerio Photoreceptors, Amacrine- and Horizontal cells, collected 38-,48- and 58 hours post fertilization

This analysis was conducted to elucidate potential guidance of retinal horizontal cells (HCs) by photoreceptors (PRs) and/or amacrine cells (ACs), during the retinal lamination. We dissected retinae from three different developmental stages, corresponding to different stages in HCs lamination process, and separated HCs, PRs and HCs, based on their differential GFP and DsRed expression in the Lhx1:GFP; ptf1a:DsRed zebrafish transgenic line. Four replicates of each sample were lysed, converted to cDNA sequenced using the SMART-SEQ2 protocol.