294-fold mini all-α protein library encoded by 7,350 amino-acid sequences (project "flood of fold" )

This repository includes 3 compressed archive files for the “flood-of-fold” mini-protein library project. FloodOfFolds_294_backbone_models.tar.gz includes 294 mini all-α backbone models showing distinct topologies (folds). They are poly-VAL models. FloodOfFolds_7350_designs_MODEL.tar.gz includes 7,350 design protein models in the pdb format for the 294 mini-protein library. 25 amino-acid sequences were designed for each backbone model (25 x 294 = 7,350). FloodOfFolds_7350_designs_FASTA.tar.gz includes 7,350 fasta files derived from the pdb files in FloodOfFolds_7350_designs_MODEL.tar.gz. See also here for results of folding simulations: https://zenodo.org/record/5526849#.YWRhFBBBw1I Acknowledgement: K.S. and S.M. would like to deeply thank Koga laboratory at Institute for Molecular Science providing computational resources. Most of the computations for model building and folding simulations were performed using the facilities at the Research Center for Computational Science, Okazaki, Japan.