Pleistocene climatic and eustatic fluctuations explain the diversification and biogeographic connections of African and southern European arid-dwelling faunas
收藏DataCite Commons2021-07-12 更新2024-07-28 收录
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https://figshare.com/articles/dataset/Pleistocene_climatic_and_eustatic_fluctuations_explain_the_diversification_and_biogeographic_connections_of_African_and_southern_European_arid-dwelling_faunas/14706057/2
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<b>Samples.xlsx</b>: Description of individual and population codes used in the different analyses and genomic datasets. <b><br></b><b>Dericorys_c85d5m18sh15_10000SNPs.str</b>: Input file (10,000 random SNPs) used to perform genetic clustering analyses (STRUCTURE) including all populations of <i>Dericorys millierei</i> and <i>D. carthagonovae</i>. <b><br></b><b>Carthagonovae_c85d5m7sh15_10000SNPs.str</b>: Input file (10,000 random SNPs) used to perform genetic clustering analyses (STRUCTURE) for populations of <i>Dericorys carthagonovae</i>. <b><br></b><b>Dericorys_c85d5m18sh15_</b> <b>18550SNPs.str</b>: Input file (18,550<b> </b>SNPs) used to perform principal component analyses (PCA). <b><br></b><b>Dericorys_c85d5m18sh15.nex</b>: Input file (NEXUS format) used to perform phylogenomic analyses in SNAPP. <b><br></b><b>SVDQUARTETS.zip</b>: This ZIP folder contains the genetic datasets (NEXUS format) used to perform phylogenomic analyses in SVDQUARTETS. <b><br></b><b>BPP.zip</b>: This ZIP folder contains the input files used to perform A00 and A01 analyses in BPP. <b><br></b><b>PHYLONETWORKS.zip</b>: This ZIP folder contains the input files used to perform PHYLONETWORKS analyses. <b><br></b><b>Dericorys_c85d5m18sh15.treemix</b>: Input file (TREEMIX format) used for phylogenomic analyses in TREEMIX.<b></b> <b><br></b><b>FASTSIMCOAL2.zip</b>: This ZIP folder contains input files for demographic analyses in FASTSIMCOAL2. <b><br></b><b>OccurrenceData.csv</b>: Occurrence data used for environmental niche modelling (ENM).<br><b>ENM_Maps.zip</b>: This ZIP folder contains maps showing the distribution of climatically suitable habitats for <i>Dericorys millierei</i> and <i>D. carthagonovae</i> at five temporal snapshots (0 ka, 5 ka, 10 ka, 15 ka and 22 ka).
提供机构:
figshare
创建时间:
2021-05-31



