List of 25 CD105+ cell unique proteins with the highest Scaffold ranking.

Proteins identified by LC MS/MS analysis of the nuclear, cytoplasmic and membrane subfractions of CD105+ cells were compared to those identified from CD105− cells in each of 3 replicate experiments. Unique proteins were sorted according to their Scaffold rank scores. The 25 highest ranking proteins are listed along with the number of unique peptides identified and percentage of protein coverage from a representative experiment (n = 3). Also listed are the subcellular fractions from which each protein was consistently isolated in each of the three experiments.