Global stony coral occurrence points & estimated species diversity
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<br>"all_points.csv" includes occurrence records of stony corals; it was originally downloaded from Global Biodiversity Information Facility and Ocean Biodiversity Information System, then cleaned and reshaped. This data was used to analyze geographical patterns of stony coral diversity: Kusumoto, B., Costello, M. J., Kubota, Y., Shiono, T., Wei, C. L., Yasuhara, M., & Chao, A. (2020). Global distribution of coral diversity: Biodiversity knowledge gradients related to spatial resolution. <i>Ecological Research</i>, <i>35</i>(2), 315-326.<br>"all_points.csv"---------------------------------<br>Data infoData source: GBIF, OBIS<br>Num points: 350437<br>Num sp: 716 species<br>Columns info:<br>"species": species name<br>"source" : data source<br>"OBISid_gbifID": ID given in OBIS/GBIF<br>"latitude": observed latitude<br>"longitude": observed longitude<br>"key": unique ID for 1 degree grid cell<br>"x": center longitude of 1 degree grid cell<br>"y": center latitude of 1 degree grid cell<br>-----------------------------------------------------------<br>"stony.coral_diversity.csv" includes estimated species diversities at q = 0, 1, 2 (species richness, Shannon diversity, and Simpson diversity). The species number from stacked expert range-maps (Veron 2000) is also included for comparison.<br><br>"stony.coral_diversity.csv"---------------------------------------------Column info:<br>id ID of 1 degree grid cell<br>x center longitude of grid cell<br>y center latitude of grid cell<br>obs.D0 observed diversity at q = 0 (species richness)<br>obs.D1 observed diversity at q = 1 (Shannon diversity)<br>obs.D2 observed diversity at q = 2 (Simpson diversity)<br>asy.D0 asymptotic diversity at q = 0 (species richness) asy.D1 asymptotic diversity at q = 1 ( Shannon diversity) <br>asy.D2 asymptotic diversity at q = 2 ( Simpson diversity ) <br>SC1.D0 diversity at q = 0 (species richness) standardized at 1 percentile of sampling coverage<br>SC1.D1 diversity at q = 1 (Shannon diversity ) standardized at 1 percentile of sampling coverage<br>SC1.D2 diversity at q = 2 (Simpson diversity) standardized at 1 percentile of sampling coverage<br>SC2.D0 diversity at q = 0 (species richness) standardized at 2 percentile of sampling coverage<br>SC2.D1 diversity at q = 1 (Shannon diversity) standardized at 2 percentile of sampling coverageSC2.D2 diversity at q = 2 ( Simpson diversity) standardized at 2 percentile of sampling coverage<br>SC3.D0 diversity at q = 0 (species richness) standardized at 5 percentile of sampling coverage<br>SC3.D1 diversity at q = 1 (Shannon diversity) standardized at 5 percentile of sampling coverage<br>SC3.D2 diversity at q = 2 (Simpson diversity) standardized at 5 percentile of sampling coverage<br>veron Species number from stacked species range maps (Veron 2000)<br><br><br>
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figshare
创建时间:
2021-10-28



