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Additional file 1 of Genomics of asthma, allergy and chronic rhinosinusitis: novel concepts and relevance in airway mucosa

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Figshare2020-10-28 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Additional_file_1_of_Genomics_of_asthma_allergy_and_chronic_rhinosinusitis_novel_concepts_and_relevance_in_airway_mucosa/13161642
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Additional file 1: Table S1. The full Excel file (as a supple file) of the results of ours including also the SNPs with no relevant signs of airway epithelial expression, and the PMIDs. There are several rows and they are based on 1) associated transcript for particular gene 2) allele changes 3) Multiple GWAS-studies that have shown the same loci. These explain the over 60 000 rows of the dataset. Abbreviations: N/A = not available, Protein_Atlas_Lung_Expression(TPM02) = 0 = TPM less than 1; 1 = 1 < TPM < 100; 2 = TPM 100 or over, Protein_Atlas_Lung_Expression(TPM) = total TPM value, HPA BrProt exp epi = Bronchial epithelial protein expression of immunohistochemical staining figures of The Human Protein Atlas, HPA Br Prot exp = Bronchial protein expression of immunohistochemical staining figures of The Human Protein Atlas, HPA Nasoph Prot exp epi = Nasopharyngeal epithelial protein expression of immunohistochemical staining figures of The Human Protein Atlas, HPA Nasoph Prot exp = Nasopharyngeal protein expression of immunohistochemical staining figures of The Human Protein Atlas, HPA Nasoph GTEx (RPKM) = The Genotype-Tissue Expression (GTEx) of Nasopharyngeal mucosa of The Human Protein Atlas, RPKM = Reads Per Kilobase of transcript, per Million mapped reads, HPA Bronch GTEx (RPKM) = The Genotype-Tissue Expression (GTEx) of Bronchial mucosa of The Human Protein Atlas, GXA = Gene Expression Database.
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2020-10-28
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