SARS-Cov2 Kraken database
收藏NIAID Data Ecosystem2026-03-11 收录
下载链接：
https://zenodo.org/record/3741443
下载链接
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资源简介：
Viral Kraken database built on 04/04/2020 for nf-core/viralrecon pipeline testing,
Kraken version:
Kraken version 2.0.8-beta
Copyright 2013-2019, Derrick Wood (dwood@cs.jhu.edu)
Commands:
kraken2-build --db kraken2_viral --threads 2 --use-ftp --download-taxonomy
kraken2-build --db kraken2_viral --threads 2 --use-ftp --download-library viral
kraken2-build --db kraken2_viral --threads 2 --use-ftp --build
Files:
## Minimal kraken2-build output files required to run kraken2
## See kraken2_viral.tree.txt for file listing
kraken2_viral.tar.gz
kraken2_viral.tar.gz.md5
kraken2_viral.tree.txt
## Additional kraken2-build output files that can be used in conjunction with bracken-build
## See kraken2_viral.bracken.tree.txt for file listing
kraken2_viral.bracken.tar.gz
kraken2_viral.bracken.tar.gz.md5
kraken2_viral.bracken.tree.txt
创建时间：
2020-04-06
