Additional file 2 of Single-cell transcriptomic and chromatin accessibility analyses of dairy cattle peripheral blood mononuclear cells and their responses to lipopolysaccharide

Additional file 2: Table S1. Summary of scRNA-seq and scATAC-seq dataset. Table S2. Marker genes of each cell type. Table S3. Cattle PBMC cell type annotation under three resolutions using Azimuth. Table S4. Cattle PBMC cell type annotation using SingleR. Table S5. The expression of 93 cell cycle-related genes in each cell. Table S6. The summary information of TF identified by SCENIC. Table S7. Single cell’s pseudotime value obtained from Monocle2. Table S8. Gene list of each module identified by WGCNA. Table S9. Enrichment results of each module identified by WGCNA.