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Sablefish (Anoplopoma fimbria) genotypes derived from a 300-locus SNP panel: Analyzes of these data are reported in in Gill et al. (Aquaculture; in revision) and Liu et al. (Aquaculture, in revision)

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Zenodo2025-10-14 更新2026-05-26 收录
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This dataset contains sablefish phenotype (weight in kg) and genotype data used for GWAS, Genome Prediction and PHATE analyses. These data are reported in two manuscripts: “Phenomic and genomic analyses of spine shape in 800 cultured sablefish (Anoplopoma fimbria)”. This study used 300-locus genotypes, spine phenotypes, and PHATE analyses to test the hypothesis that spine curvatures are influenced by genetic variation. This paper reported sample collection details: Implant-1, 2019: 200 individuals collected at harvest in August 2021; Implant-2, 2019: 200 individuals collected at harvest in October 2021; Implant-5, 2019: 380 individuals collected at harvest in February and March 2022. “Predicting growth rate in sablefish (Anoplopoma fimbria) using a 300-locus SNP panel”. This study used 300-locus genotypes and weight data at harvest to test the hypothesis that variation at one or more of the 300 SNPs was associated with variation in weight. This paper utilized the same data as above but pooled Implant-1 and Implant-2 samples into 'Group-1' (N=400). 'Group-2' (N=380) included individuals from Implant-5, 2019.

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Zenodo
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2025-10-14
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