Nucleosome driven transcription factor binding and gene regulation [ChIP-Seq]

ChEBI2012-12-01 更新2026-07-21 收录

转录因子结合分析

核小体定位与基因调控

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-41466 数据链接链接失效反馈

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Nucleosome driven transcription factor binding and gene regulation [ChIP-Seq]

创建时间：

2012-12-01

Investigation of Rap1 binding occupancy in global H3-depletion condition [Rap1_ChIPseq]. Investigation of Rap1 binding occupancy in global H3-depletion condition [Rap1_ChIPseq]

转录因子结合分析

染色质免疫沉淀测序

We constructed the inducible H3-depleted and FLAG-tag of the repressor activator protein 1 (Rap1) yeasts to investigate the depleted effect of nucleosomal H3 on DNA-binding profiles of Rap1 and result

NIAID Data Ecosystem90

Induced Cdx2 binding in embryonic stem cells and endodermal cells

转录因子结合分析

发育表观遗传学

Regulatory proteins can bind to different sets of genomic targets in various cell types or conditions. To reliably characterize such condition-specific regulatory binding we introduce MultiGPS, an int

NIAID Data Ecosystem60

Allele-specific binding analysis of rs242561 by NRF2 ChIP tagmentation sequencing

转录因子结合分析

等位基因特异性

We identified a SNP rs242561, located within a regulatory region of the MAPT gene (encoding microtubule-associated protein Tau). It was consistently occupied by NRF2/sMAF in multiple ChIP-seq experime

NIAID Data Ecosystem30

SMAD3 and SOX4 binding profiling in human breast cell lines. SMAD3 and SOX4 binding profiling in human breast cell lines

转录因子结合分析

乳腺癌分子机制

In order to identify genes co-bound by SOX4 and SMAD3 in the context of breast cancer, different breast cell lines (HMLEs, MDA-MB-231 or HCC-1954) were used. Due to low endogenous expression levels fo

NIAID Data Ecosystem80

EBNA3 proteins regulate EBNA2 binding to distinct RBPJ genomic sites

EBV致癌机制

转录因子结合分析

We report the application of ChIP Seq to study the Epstein Barr Virus Nuclear Antigen EBNA3A, EBNA3B, EBNA3C, an essential transcriptional regulator involved in the transformation of Resting B Lymphoc

NIAID Data Ecosystem50

Nucleosome driven transcription factor binding and gene regulation [ChIP-Seq]

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