Additional file 1 of Comparative Field Evaluation and Transcriptome Analysis Reveals that Chromosome Doubling Enhances Sheath Blight Resistance in Rice

Additional file 1. Table S1 Information on 35 autotetraploid genotypes and 35 cultivars from which they derived. Table S2 0–9 rating system for evaluating sheath blight disease rating Table S3 The gene-specific primers used for qRT-PCR. Table S4 Correlation coefficients for field resistance of 35 autotetraploid rice genotypes planted on March 1, 2020, July 26, 2020 and February 25, 2021. Table S5 Correlation coefficients for field resistance of 35 diploid rice genotypes planted on March 1, 2020, July 26, 2020 and February 25, 2021. Table S6 Two-way analysis of variance using the lesion length data from 35 autotetraploids and 35 diploids over three cultivation environments. Lesion length was examined at 10 dpi. Table S7 Two-way analysis of variance using the lesion length data from 35 autotetraploids and 35 diploids over three cultivation environments. Lesion length was examined at 28 dpi. Table S8 Two-way analysis of variance using the disease rating data from 35 autotetraploids and 35 diploids over three cultivation environments. Table S9 Three-way analysis of variance using the lesion length data from 35 genotypes over three cultivation environments at 10 dpi. The 35 genotypes consisted of 35 diploids and their corresponding autotetraploids. Table S10 Three-way analysis of variance using the lesion length data from 35 genotypes over three cultivation environments at 28 dpi. The 35 genotypes consisted of 35 diploids and their corresponding autotetraploids. Table S11 Three-way analysis of variance using the disease rating data from 35 genotypes over three cultivation environments. The 35 genotypes consisted of 35 diploids and their corresponding autotetraploids. Table S12 Average lesion length, average disease rating, 7 rating scores for 35 autotetraploid rice genotypes planted in three environments. Table S13 Average lesion length, average disease rating, 7 rating scores for 35 diploid rice genotypes planted in three environments. Table S14 Statistical analysis of 35 diploid and autotetraploid rice genotypes planted in three environments. Table S15 Field resistance statistics and comparison between 35 autotetraploid and diploid rice varieties. Table S16 Average lesion length, average disease rating, 7 rating score for 35 autotetraploid and diploid rice genotypes across three environments. Table S17 Plant height and sheath blight field resistance of the autotetraploid genotypes used for correlation analysis. Table S18 Plant height and sheath blight field resistance of the diploid genotypes used for correlation analysis. Table S19 Correlation coefficients between plant height and sheath blight field resistance for both autotetraploid and diploid genotypes. Table S20 RNA-seq read counts and read mapping statistics for the rice genome. Table S21 The regulation of the DEGs in E29 (E29-0 hpi vs E29-24 hpi). Table S22 The regulation of the DEGs in T49 (T49-0 hpi vs T49-24 hpi). Table S23 The regulation of the DEGs in E29 (E29-0 hpi vs E29-48 hpi). Table S24 The regulation of the DEGs in T49 (T49-0 hpi vs T49-48 hpi). Table S25 Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways for the DEGs in E29 and T49. Table S26 The regulation of the DEGs in ubiquinone and other terpenoid-quinone biosynthesis pathway. Table S27 The regulation of the DEGs in diterpenoid biosynthesis pathway.