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Additional file 2 of Deep-sea Bacteroidetes from the Mariana Trench specialize in hemicellulose and pectin degradation typically associated with terrestrial systems

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DataCite Commons2024-02-16 更新2024-08-18 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_2_of_Deep-sea_Bacteroidetes_from_the_Mariana_Trench_specialize_in_hemicellulose_and_pectin_degradation_typically_associated_with_terrestrial_systems/23902849
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Additional file 2: Table S1. Metagenomes used in this study. Table S2. Relative abundance (copies per million reads) of Bacteroidetes CAZyme genes in different samples. Table S3. Genome information of MAGs used in this study. Table S4. Genome relative abundance (percent of mapped reads) of all MAGs in metagenomic samples. Table S5. Predicted PULs in all MAGs used in this study. Table S6. Distribution of CAZyme genes in all MAGs. Table S7. Genome information of Mesoflavibacter genomes used in this study. Table S8. Pairwise comparation of genes from the arabinan PULs in Mangrovimonas sp. ST2L15 and Mesoflavibacter profundi MTRN7. Table S9. Components of marine mineral medium (MMM). Table S10. The primers used for RT-qPCR. Table S11.The primers used for gene cloning. The cleavage sites are underlined.
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figshare
创建时间:
2023-08-08
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