Additional file 1 of Rumen and hindgut microbiome regulate average daily gain of preweaning Holstein heifer calves in different ways

Additional file 1: Table S1. Nutrient content of Starter and milk replacer (DM basis, %). Table S2. Composition of PYG medium. Table S3. Comparison of physiological parameters and rumen fermentation characteristics between LADG and HADG calves. Table S4. Summary of sequence data generated from rumen samples of 8 LADG and 8 HADG calves. Table S5. Wilcoxon rank sum test was used to compare the rumen microbial domain. Table S6. The relative abundances of the top 10 rumen bacterial phyla, genera and species between HADG and LADG calves. Table S7. The significant differences in rumen bacterial phyla, genera, and species between HADG and LADG calves. Table S8. The relative abundances of ruminal KEGG pathways between HADG and LADG calves. Table S9. Significantly different rumen metabolites between HADG and LADG calves. Table S10. ADG-associated metabolites in rumen. Table S11. Summary of sequence data generated from fecal samples of 8 LADG and 8 HADG calves. Table S12. Wilcoxon rank sum test was used to compare the fecal microbial domain. Table S13. The relative abundances of the top 10 feces bacterial phyla, genera and species between HADG and LADG calves. Table S14. The Significant differences in fecal bacterial genera and species between HADG and LADG calves. Table S15. Significantly different fecal metabolites between HADG and LADG calves. Table S16. ADG-associated metabolites in feces. Table S17. Significantly different plasma metabolites between HADG and LADG calves. Table S18. ADG-associated metabolites in plasme. Table S20. Differential metabolites due to by Acidaminococcus fermentans P41 fermentation.