five

find-uniq-BLAST-hits.pl

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DataONE2017-03-20 更新2024-06-26 收录
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This script filters duplicates from a BLAST table (-outfmt 6). When the identical data (in our case Pool-Seq reads) is blasted against similar reference sequences (in our case variants of a specific transposable element,i.e. the Cla-element), identical query sequences might fit to multiple reference sequences. This produces duplicates in the merged BLAST output. With this script retains the first occurrence of a query sequence and outputs a table of the same format as the input (BLAST -outfmt 6).
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2017-03-20
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