Test data for sv-callers workflow

This distribution includes data analyzed by the <em>sv-callers</em> workflow (v1.1.0) in the single-sample (germline) and paired-sample (somatic) modes: GRCh37 and b37 human reference genomes (in<em> .fasta</em>) excluded genomic regions (in<em> .bed[pe]</em>) ENCODE:ENCFF001TDO Layer et al. (2014) structural variants (SVs) detected by the workflow (in <em>.vcf</em>) SV <em>truth</em> sets (in<em> .bed[pe]</em>) Personalis/1000 Genomes Project data by Parikh et al. (2016) PacBio/Moleculo data by Layer et al. (2014) workflow samples (in<em> .csv</em>) and config files (in <em>.yaml</em>) short-read alignments are not included due to large sizes but are freely available for download (in <em>.bam</em>) NA12878 sample COLO829 tumor sample with matched normal sample Jupyter Notebooks to analyze SV callsets (in <em>.ipynb</em>)