Additional file 2 of Polymorphism-driven transcriptomic changes in anthelmintic metabolism pathways of Anisakis simplex s.s. L3 larvae

Additional file 2: Table S1. Detailed bioinformatics workflow. Table S2. Comparison of log2FoldChange values between RNA-seq and real timePCR.. Table S3. The table summarizes RNA-seq quality and yield across 16 samples.. Table S4. Differentially expressed genes identified in A. simplex after three medicine treatment . Table S5. Differentially expressed long nonocoding RNA identified in A. simplex after three medicine treatment . Table S6. Correlation between DELs and DEGs after Albendazol treatment. Table S7. Correlation between DELs and DEGs after Ivermectin treatment. Table S8. Correlation between lncRNA and DEGs after Pyrantel treatment. Table S9. DAS events identified after Albendazol, Ivermectin and Pyrantel treatment. Table S10. SNVs indicated difference in allele specific expression (ASE). Table S11.Single nucleotide variation on DNA seqeunces by Nanopore seqeuncing . Table S12. DEGs, DASs and SNVs assignment to GO terms..