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Genome annotation; prediction of ADA, CREBBP, IGF1R, INSRA, MGAT5, MTR, NPR2 genes in fish genomes

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Mendeley Data2026-04-18 收录
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Data comprised of 7 genes which are predicted in 151 organisms, these genes comprised of ADA, CREBBP, IGF1R, INSRA, NPR2, MTR and MGAT5. These genes are considered in aging process, all these genes were BLAST searched in 174 fish genomes and the species in which these genes were not predicted yet are predicted in this work. Genes were not submitted with NCBI database as fish genomes have gaps in between as of this we did not prefer to submit this with NCBI, but this data comprised of major information regarding position of gene on genome, gene structure, gene size and protein size. This will be very helpful in primer designing for amplification process if someone wants to work with these genes. This data is a part of data which i generated for masters research work as designed domains data i submitted with PDB sum.

本数据集包含7个基因,上述基因已在151个生物体中完成预测,涉及基因为ADA、CREBBP、IGF1R、INSRA、NPR2、MTR及MGAT5。上述基因均与衰老进程相关。本研究针对这些基因在174个鱼类基因组中开展了BLAST序列比对检索,并完成了此前未被预测到该基因的物种的基因预测工作。由于鱼类基因组存在序列间隙,本数据集未向NCBI数据库提交相关基因数据,但本数据集包含多项核心信息,包括基因在基因组上的定位、基因结构、基因长度及蛋白质长度。若研究者希望针对上述基因开展相关实验,本数据集可为扩增引物的设计提供重要参考。本数据集为本人硕士阶段研究工作所产生数据的组成部分,其中的结构域设计相关数据已提交至PDBsum数据库。

创建时间:
2018-12-15
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