Whole-genome ancestral reconstruction results: Simulated data.

The second column shows the total number of IBD pairs identified between genotyped individuals. The third column shows the number of unique IBD segments per chromosome. The fourth column shows how many iterations the algorithm needed to converge. The fifth column shows the number of ancestral (ungenotyped) individuals we were able to successfully reconstruct. The sixth column shows the average sequence similarity of the individuals we were able to reconstruct, as compared to their true genomes. The rightmost two columns show the number of individuals that we predicted would be very well reconstructed, along with their average accuracies.